EchinoDB


EchinoDB is a database consisting of amino acid sequence othoclusters from echinoderm transcriptomes. We sampled taxa to span the deepest divergences within each of the five extant echinoderm classes. Data can be searched by BLASTX or BLASTP or annotation and database identifiers from the Strongylocentrotus purpuratus reference protein set at NCBI.

Aligned loci and trees from Linchangco et al., 2017

Search EchinoDB


RefSeq ID, GI number, gene name keywords, etc.
Prefix-based wildcards are also supported (ex: chlor*)
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